In order for the GoDaddy certificate to show up in Trusted Root Certificatio Authorities in Windows Server 2003 you need to download the GoDaddy CRL from here…
https://certs.godaddy.com/Repository.go
New Go Daddy Certificate Chain
- Go Daddy Class 2 Certification Authority Root Certificate
- gd-class2-root.crt
- Certificate Thumbprint Algorithm: sha1
- Certificate Thumbprint: 27 96 ba e6 3f 18 01 e2 77 26 1b a0 d7 77 70 02 8f 20 ee e4